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Table 2 Overlap of m5Cs with miRNA target sites in the 3′ UTR of ESC and brain RNA

From: Distinct 5-methylcytosine profiles in poly(A) RNA from mouse embryonic stem cells and brain

  Total poly(A) RNA Nuclear poly(A) RNA
ESC Brain ESC Brain
m5Cs in 3′ UTR 1774 863 1687 1027
3′ UTRs with m5Cs 700 287 686 282
m5Cs in miRNA targets 310 63 274 84
miRNA targets with m5Cs 241 43 233 62
miRNA targets in 3′ UTRs with m5Cs 13,629 5693 12,050 5535
p value (random permutation test) 0.100 10E-4 0.0634 10E-4
Z-score –1.2454 –5.5334 –1.5002 –5.6833
No. of iterations 10,000 10,000 10,000 10,000