Table 2 Predicted consequences of variants
SNPs | Indels | Exonic SVs | |||||
|---|---|---|---|---|---|---|---|
Strain | Synonymous | Non-synonymous | Stop gain/loss | Frameshift variant | Inframe variant | Deletions | Insertions |
BUB/BnJ | 9751 | 6050 | 44 | 41 | 169 | 1247 | 720 |
C57BL/10J | 581 | 298 | 0 | 4 | 8 | 57 | 102 |
C57BR/cdJ | 4400 | 2948 | 18 | 26 | 52 | 288 | 227 |
C58/J | 5238 | 3362 | 23 | 35 | 69 | 330 | 254 |
DBA/1J | 9782 | 6198 | 39 | 53 | 149 | 419 | 389 |
I/LnJ | 10389 | 6249 | 42 | 52 | 150 | 690 | 1671 |
KK/HiJ | 10816 | 6197 | 50 | 56 | 140 | 599 | 462 |
MOLF/EiJ | 33710 | 17,311 | 108 | 172 | 439 | 897 | 1305 |
NZB/B1NJ | 10403 | 6367 | 43 | 62 | 146 | 500 | 390 |
NZW/LacJ | 10434 | 6326 | 46 | 61 | 146 | 673 | 425 |
RF/J | 9891 | 6174 | 39 | 56 | 140 | 2033 | 862 |
SEA/GnJ | 9309 | 6027 | 38 | 57 | 138 | 1284 | 614 |
ST/bJ | 9021 | 5578 | 45 | 59 | 133 | 713 | 413 |