OPERA-LG: efficient and exact scaffolding of large, repeat-rich eukaryotic genomes with performance guarantees

Table 2 Statistics for synthetic datasets

	D. melanogaster	C. elegans	H. sapiens
Assembly ID	GCF_000001215.2	GCF_000002985.5	hg19
Genome size (Gbp)	0.1	0.1	3.2
Chromosomes	7	6	24
Paired-end libraries^a	80 bp, 140 ± 10 bp, 40×
Additional paired-end libraries^a	NA	NA	80 bp, 700 ± 70 bp, 10×
Mate-pair libraries^a	50 bp, 3 ± 0.3 kbp, 2×; 50 bp, 10 ± 1 kbp, 2×; 50 bp, 20 ± 2 kbp, 2×
Additional mate-pair libraries^a	50 bp, 10 ± 1 kbp, 10× 50 bp, 10 ± 1.5 kbp, 2× 50 bp, 10 ± 2 kbp, 2×	50 bp, 10 ± 1 kbp, 10×	NA

^aLibrary details are specified in the format: read length, insert size, base pair coverage (NA, not applicable)

ISSN: 1474-760X