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Table 7 Performance metrics under simulation scenario 5 (low precision)

From: An evaluation of methods correcting for cell-type heterogeneity in DNA methylation studies

Method Number of false positives Power KS GIF \(\hat {K}\)
Unadjusted 127 0.622 0.241 1.47
Ref-based 354 0.654 0.198 1.49
Ref-free 596 0.670 0.145 1.48 12
SVA 123 0.644 0.091 1.23 6
ISVA 72 0.482 0.040 1.12 11
EWASher 1 0.052 0.030 0.92
CellCDec 169 0.598 0.008 1.27
Deconf 184 0.644 0.204 1.41
RUV 2943 0.654 0.228 1.93 33
  1. KS Kolmogorov–Smirnov statistic, GIF genomic inflation factor