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Table 6 Performance metrics under simulation scenario 4 (high precision)

From: An evaluation of methods correcting for cell-type heterogeneity in DNA methylation studies

Method Number of false positives Power KS GIF \(\hat {K}\)
Unadjusted 368 0.600 0.142 1.32
Ref-based 64 0.460 0.043 1.04
Ref-free 437 0.694 0.101 1.36 13
SVA 79 0.534 0.032 1.09 11
ISVA 198 0.522 0.062 1.20 14
EWASher 16 0.072 0.038 0.94
CellCDec 54 0.546 0.031 1.05
Deconf 58 0.520 0.014 1.02
RUV 155 0.568 0.051 1.15 32
  1. KS Kolmogorov–Smirnov statistic, GIF genomic inflation factor