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Table 10 P values for sites previously found to be associated with smoking [33]

From: An evaluation of methods correcting for cell-type heterogeneity in DNA methylation studies

Site

Unadj

Ref-Based

Ref-free

SVA

ISVA

EWASher a

RUV

cg06644428

2.83E-20

2.04E-21

1.96E-27

9.19E-27

4.41E-20

–

1.64E-22

cg05951221

2.72E-43

1.21E-45

5.41E-56

3.96E-58

3.20E-45

5.77E-01

1.05E-53

cg21566642

1.72E-49

6.93E-50

4.20E-54

6.59E-58

8.09E-54

6.45E-01

5.94E-58

cg01940273

2.09E-35

3.30E-38

4.07E-43

7.07E-46

6.93E-42

3.07E-01

1.45E-44

cg19859270

4.91E-13

2.52E-22

4.76E-35

2.21E-35

5.15E-28

–

2.16E-35

cg05575921

1.58E-35

7.79E-39

7.89E-52

5.65E-41

1.34E-40

–

3.43E-41

cg21161138

2.43E-07

2.99E-10

1.24E-25

1.68E-25

2.84E-21

9.05E-01

6.07E-21

cg06126421

1.78E-23

1.06E-33

7.38E-34

7.37E-33

9.69E-34

7.05E-01

2.55E-36

cg03636183

9.27E-21

6.74E-24

6.10E-37

1.51E-34

4.77E-30

3.09E-01

1.60E-31

  1. aSeveral sites were filtered out by EWASher