Table 3 Co-factors identified in the top 10 motifs predicted by each method for the human validation dataset
SEECER | Velvet | Alignment | |
|---|---|---|---|
MAX | MYC, MYCN | MYC, MYCN | MYC, MYCN |
HCFC1 | GABPA, SP1 | GABPA, SP1 | |
CEBPB | CEBPA | CEBPA, SP1, EGR1 | FOX01, CEBPA |
SREBF1 | SP1 | SP1 | |
TCF7L2 | |||
STAT1 | |||
TAL1 | SP1, GATA3 | TCF3 | GATA3, TCF3 |