Table 2 Statistics for aligning human chromosome 22 to the chimp genome (step 1 only: no split-alignment)
From: Split-alignment of genomes finds orthologies more accurately
Method | Seeds | Alignments ×103 | Time | Output | |
|---|---|---|---|---|---|
|  | ×106 | gapless | gapped | (min) | (MB) |
mask | 856 | 1641 | 33 | 7 | 110 |
unmask | 1881 | 161551 | 118308 | 583 | 72945 |
cull | 1881 | 26740 | 12243 | 93 | 7479 |