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Table 4 Top 10 GO and KEGG enriched categories for stabilizing and diversifying selection

From: Evaluating intra- and inter-individual variation in the human placental transcriptome

Mode

Category

KEGG term

Adjusted P value

GO category

Ontology

GO term

Adjusted P value

Stabilizing

3040

Spliceosome

6.47E-23

GO:0016071

BP

mRNA metabolic process

6.29E-79

Stabilizing

3010

Ribosome

3.19E-22

GO:0044260

BP

Cellular macromolecule metabolic process

3.99E-65

Stabilizing

3013

RNA transport

2.75E-15

GO:0005515

MF

Protein binding

8.51E-61

Stabilizing

3050

Proteasome

6.39E-15

GO:0003723

MF

RNA binding

1.30E-59

Stabilizing

4141

Protein processing in endoplasmic reticulum

6.39E-15

GO:0044267

BP

Cellular protein metabolic process

3.21E-59

Stabilizing

190

Oxidative phosphorylation

1.03E-12

GO:0043170

BP

Macromolecule metabolic process

5.79E-57

Stabilizing

5016

Huntington's disease

1.23E-11

GO:0044237

BP

Cellular metabolic process

4.46E-55

Stabilizing

5012

Parkinson's disease

3.76E-11

GO:0008150

BP

Biological process

2.03E-52

Stabilizing

4120

Ubiquitin mediated proteolysis

4.53E-09

GO:0044265

BP

Cellular macromolecule catabolic process

1.00E-50

Stabilizing

3015

mRNA surveillance pathway

2.02E-07

GO:0009987

BP

Cellular process

2.03E-50

Diversifying

4060

Cytokine-cytokine receptor interaction

1.47E-08

GO:0044707

BP

Single-multicellular organism process

1.66E-15

Diversifying

4080

Neuroactive ligand-receptor interaction

1.88E-06

GO:0032501

BP

Multicellular organismal process

2.66E-15

Diversifying

5144

Malaria

0.000537871

GO:0007155

BP

Cell adhesion

5.78E-14

Diversifying

5323

Rheumatoid arthritis

0.000823394

GO:0022610

BP

Biological adhesion

5.78E-14

Diversifying

4514

Cell adhesion molecules (CAMs)

0.008404931

GO:0008083

MF

Growth factor activity

4.19E-12

Diversifying

5140

Leishmaniasis

0.010748899

GO:0005539

MF

Glycosaminoglycan binding

6.15E-12

Diversifying

5143

African trypanosomiasis

0.014357322

GO:0005125

MF

Cytokine activity

7.81E-12

Diversifying

4340

Hedgehog signaling pathway

0.014357322

GO:0097367

MF

Carbohydrate derivative binding

2.26E-11

Diversifying

260

Glycine, serine and threonine metabolism

0.027173137

GO:0008201

MF

Heparin binding

2.26E-11

Diversifying

4976

Bile secretion

0.027173137

GO:0005102

MF

Receptor binding

4.08E-11

  1. Enriched pathways for stabilizing and diversifying genes. The table provides the selective mode, the category identifier (as in Table 3), the associated term or brief description, and the Benjamini-Hochberg adjusted P value.