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Table 2 Correlation between microRNAs and mean HOX-signature expression in 106 GBM samples from TCGA, top 2 percentile positively and negatively correlated microRNAs

From: Chromosome 7 gain and DNA hypermethylation at the HOXA10 locus are associated with expression of a stem cell related HOX-signature in glioblastoma

 

Spearman’s rho

P value (two-sided)

hsa-miR-196b (HOXA locus)

0.69

<0.01

hsa-miR-10b (HOXD locus)

0.50

<0.01

hsa-miR-196a (HOXB/C locus)

0.5

<0.01

hsa-miR-148a

0.42

<0.01

hsa-miR-106b

0.35

<0.01

hsa-miR-25

0.32

<0.01

hsa-miR-496

0.31

<0.01

hcmv-miR-UL148D

0.3

<0.01

hsa-miR-337

0.29

<0.01

hsa-let-7c

0.29

<0.01

hsa-miR-130b

0.29

<0.01

hsa-miR-199a*

−0.27

<0.01

hsa-miR-223

−0.27

<0.01

hsa-miR-148b

−0.28

<0.01

hsa-let-7f

−0.29

<0.01

hsa-miR-125a

−0.29

<0.01

hsa-let-7d

−0.3

<0.01

hsa-miR-98

−0.3

<0.01

hsa-let-7 g

−0.33

<0.01

hsa-miR-143

−0.36

<0.01

hsa-miR-107

−0.37

<0.01

hsa-miR-145

−0.42

<0.01

  1. Lines in bold highlight microRNAs transcribed from HOX loci.