Table 1 Summary of sequence data used in the de novo assembly of the draft P. veris genome
From: The draft genome of Primula veris yields insights into the molecular basis of heterostyly
Library type | Platform | Reads | Bases | Coverage a | Insert size a (bp) | Read length a (bp) |
|---|---|---|---|---|---|---|
Standard paired-end | Illumina HiSeq | 222,499,994 | 22,249,999,400 | 50 | 180 | 100 |
Mate pair (small) | Illumina HiSeq | 59,854,090 | 5,985,409,000 | 15 | 3,298 | 100 |
| Â | Illumina MiSeq | 109,369,174 | 8,340,785,860 | 19 | 3,348 | 76 |
| Â | Ion Proton | 35,503,706 | 1,584,426,676 | 4 | 3,412 | 44 |
Total | Â | 204,726,970 | 15,910,621,536 | 38 | Â | Â |
Mate pair (medium) | Illumina HiSeq | 37,705,200 | 3,770,520,000 | 9 | 6,048 | 100 |
| Â | Illumina MiSeq | 43,084,090 | 3,590,695,375 | 8 | 6,084 | 83 |
Total | Â | 80,789,290 | 7,361,215,375 | 17 | Â | Â |
Mate pair (large) | Illumina HiSeq | 55,721,478 | 5,572,147,800 | 13 | 8,900 | 100 |
| Â | Illumina MiSeq | 42,153,704 | 3,425,486,254 | 8 | 8,938 | 81 |
Total | Â | 97,875,182 | 8,997,634,054 | 21 | Â | Â |
Total (short-read data) | Â | Â | 32,269,470,965 | 116 | Â | Â |
Long read fragment 10Â kb | PacBio RS | 2,357,643 | 3,437,918,089 | 7 | NA | 3,658b |