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Table 9 Memory usage (peak resident memory) and disk usage of error correction tools

From: Lighter: fast and memory-efficient sequencing error correction without counting

 

35×

70×

140×

chr14

Caenorhabditis elegans

 

Mem

Disk

Mem

Disk

Mem

Disk

Mem

Disk

Mem

Disk

Quake

2.8 GB

3.3 GB

7.1 GB

6.0 GB

14 GB

12 GB

48 GB

57 GB

86 GB

99 GB

Musket

119 MB

0

165 MB

0

225 MB

0

1.4 GB

0

2.5 GB

0

BLESS

11 MB

918 MB

11 MB

1.8 GB

13 MB

3.5 GB

138 MB

15 GB

175 MB

36 GB

Lighter

35 MB

0

35 MB

0

35 MB

0

514 MB

0

514 MB

0

  1. chr14, chromosome 14; mem, memory.