Table 5 Alignment statistics for the GAGE chromosome 14 dataset
From: Lighter: fast and memory-efficient sequencing error correction without counting
| Â | Â | Read level | Base level | ||
|---|---|---|---|---|---|
| Â | k | Mapped reads | Increase (%) | Matches/aligned base (%) | Increase (%) |
Original | – | 35,993,147 | – | 98.507 | – |
Quake | 19 | 32,547,091 | −9.57 | 99.845 | 1.36 |
SOAPec | 19 | 36,116,405 | 0.34 | 98.768 | 0.26 |
Musket | 19 | 36,316,699 | 0.90 | 99.109 | 0.61 |
BLESS | 27 | 36,301,816 | 0.86 | 99.411 | 0.92 |
Lighter | 19 | 36,320,688 | 0.91 | 99.235 | 0.74 |