Table 1 Origin, traditional typing, and genomic subtyping of L. pneumophila outbreak isolates
Patient | Isolate | Date of isolation | Serogroup | mAb | ST | Genomic subtype |
|---|---|---|---|---|---|---|
Edinburgh outbreak isolates | ||||||
1 | 12_4030 | 31/05/2012 | 1 | Knoxville | 191 | A |
12_4054 | 31/05/2012 | 1 | Knoxville | 191 | C | |
2 | 12_4042 | 01/06/2012 | 1 | Knoxville | 191 | A |
3 | 12_4117 | 02/06/2012 | 10 | NA | 1418 | NA |
4 | 12_4058 | 03/06/2012 | 1 | Knoxville | 191 | A |
5 | 12_4053 | 04/06/2012 | 1 | Knoxville | 191 | A |
6 | 12_4561 | 06/06/2012 | 1 | Knoxville | 191 | B |
7 | 12_4169 | 06/06/2012 | 1 | Knoxville | 191 | B |
8 | 12_4555 | 06/06/2012 | 1 | Knoxville | 191 | B |
9 | 12_4563 | 07/06/2012 | 1 | Knoxville | 191 | B |
10 | 12_4499 | 08/06/2012 | 1 | Knoxville | 191 | C |
12_4480 | Not recorded | 1 | Knoxville | 191 | C | |
11 | 12_5064 | 08/06/2012 | 1 | Knoxville | 191 | B |
11 | 12_4437 | 12/06/2012 | 1 | Knoxville | 191 | B |
12 | 12_4240 | 11/06/2012 | 1 | Knoxville | 191 | D |
13 | 12_4903 | 17/06/2012 | 1 | Knoxville | 191 | B |
14 | 12_5223 | 20/06/2012 | 1 | Knoxville | 191 | B |
15 | 12_5251 | 29/06/2012 | 1 | Knoxville | 191 | A |
12_5392 | 29/06/2012 | 1 | Knoxville | 191 | A | |
12_5383 | 29/06/2012 | 1 | Knoxville | 191 | A | |
12_5414 | 29/06/2012 | 1 | Knoxville | 191 | A | |
12_5415 | 29/06/2012 | 1 | Knoxville | 191 | A | |
Contemporary non-outbreak isolates | ||||||
NA | 12_3965 | 31/05/2012 | 1 | Benidorm | 42 | NA |
NA | 12_4251 | 07/06/2012 | 1 | Philadelphia | 616 | NA |
NA | 12_4904 | 21/06/2012 | 1 | Philadelphia | 37 | NA |
Historical non-outbreak isolates | ||||||
NA | H080160261 | 2008 | 6 | NA | 191 | NA |
NA | H080160262 | 2008 | 6 | NA | 191 | NA |
NA | H080160263 | 2008 | 6 | NA | 191 | NA |
NA | H064020049 | 2006 | 1 | Allentown | 591 | NA |
NA | H092620872 | 2009 | 6 | NA | 191 | NA |