Figure 3
From: Deciphering clonality in aneuploid breast tumors using SNP array and sequencing data
Grid plots of simulated tumor samples with different subclonal architectures. (a) Aneuploid tumor with further subclonality in a small part of the genome. (b) Tumor with three subclones, all with CN alterations. (c) Tumor with two subclones of equal size. (d) Tumor with two subclones of different sizes. Note that each data point in a grid plot represents the average CN across all sample cells. Different colors do not represent different subclones, but highlight specific parts of the genome which we discuss further in Materials and methods.