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Figure 4 | Genome Biology

Figure 4

From: Direct measurement of transcription rates reveals multiple mechanisms for configuration of the Arabidopsisambient temperature response

Figure 4

Increasing temperature affects transcript abundance by active promotion of transcription rates. (A) Histogram to show the Q10 of decay rates at 17°C for all 7,291 genes analyzed; the mean Q10 for decay rate is 3.29 and the median 2.81. (B) Histogram to show the Q10 of transcription rates at 17°C for all 7,291 genes analyzed; the mean Q10 for transcription rate is 3.57 and the median 3.40. A number greater than 1 indicates higher transcription/decay rates at 27°C than at 17°C. (C) Scatter plot showing the Q10 of transcription rate plotted against Q10 of decay rate for genes whose transcript abundances are at least 1.5-fold increased (red), 1.5 fold-decreased (blue) or unchanged (black) with increasing temperature. (D) Box plot to show the Q10 of decay rates for genes with transcript abundances that are higher, lower or unchanged at 27°C compared to 17°C. Boxes show the median and the 5th, 25th, 75th and 95th per percentiles for each group of Q10s. (E) Box plot to show the Q10 of transcription rates for genes with transcript abundances that are higher, lower or unchanged at 27°C compared to 17°C. Boxes show the median and the 5th, 25th, 75th and 95th per percentiles for each group of Q10s.

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