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Figure 1 | Genome Biology

Figure 1

From: RIP-seq analysis of eukaryotic Sm proteins identifies three major categories of Sm-containing ribonucleoproteins

Figure 1

RIP-seq experimental analysis strategies. (a) Outline of RIP-seq analysis pipeline. See Materials and methods for details. (b) Schematic diagram of the canonical Sm ring. The three sub-complexes are shown separately. (c) Schematic diagram of the Sm-domain-containing proteins used in this study. (d) Summary of the RIP-seq and RIP-qRT-PCR experiments performed, targeting all three sub-complexes of the canonical Sm ring and Tral. See Table S1 in Additional file 1 for details. Ctrl, control; GFP, green fluorescent protein; IP, immunoprecipitation; RPKM (reads per kilobase per million reads); VFP, Venus fluorescent protein.

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