From: Open access to tree genomes: the path to a better forest
Family | Genus | Species | Sequence access | Transcriptome | Related publications |
---|---|---|---|---|---|
Pinaceae | Pinus | taeda (loblolly pine) | EST sequencing (Sanger) | ||
 |  |  | EST sequencing (454) | [60] | |
 |  |  | [19] | Exome resequencing | [61] |
 | Pinus | lambertiana (sugar pine) | EST sequencing (454) | [60] | |
 | Pseudotsuga | menziesii (Douglas-fir) | EST sequencing (Sanger) |  | |
 |  |  | EST sequencing (454) | ||
 | Pinus | sylvestris (Scots pine) | EST sequencing (Sanger) |  | |
 | Pinus | pinsater (maritime pine) | EST sequencing (Sanger/454) | ||
 | Pinus | radiata (Monterey pine) | EST sequencing (Sanger) | ||
 | Picea | abies (Norway spruce) | EST sequencing (454) | [60] | |
 |  |  | [19] | EST sequencing (Next-Gen) | [73] |
 | Picea | glauca (white spruce) | [19] | UniGenes (Sanger/454) | [74] |
Salicaceae | Populus | trichocarpa (black cottonwood) | EST sequencing (Sanger) | ||
 |  |  | [19] | Exon capture | [79] |
 |  |  | UniGenes (Sanger) | [80] | |
 | Populus | tremula (European aspen) | EST sequencing (Sanger) | ||
 | Populus | tremula x tremuloides | EST sequencing (Sanger) | ||
 | Populus | tremuloides (quaking aspen) | EST sequencing (Next-Gen) | [82] | |
 | Populus | nigra (black poplar) | UniGenes (Sanger) | [83] | |
Myrtaceae | Eucalytpus | grandis (rose gum) | EST sequencing (Sanger) | ||
 |  |  | EST sequencing (NextGen) | [87] | |
 | Eucalyptus | globulus (blue gum) | EST sequencing (Next-Gen) | ||
 | Eucalyptus | camaldulensis (river red gum) | EST sequencing (RNA-Seq) | [89] | |
Fagaceae | Quercus | robur (English oak) | EST sequencing (454) | [91] | |
 | Castanea | mollissima (Chinese chestnut) | [50] | EST sequencing (454) | |
Oleaceae | Fraxinus | excelsior (European ash) | [19] | EST sequencing (454) | [94] |