Figure 3

Community structure performed at gamma = 1. For the (A) KR, (B) FDR1 and (C) FDR5 datasets, the heatmap of the correlation matrix is on the left; each row and column represents a single miRNA. Color bars indicate the submodule assignment in each dataset of every miRNA in the heatmap. Color bar segments are labeled with the module they represent. Module 1 is blue, 2 is yellow and 3 is red. Not all miRNAs in each dataset are present in the other two; miRNAs that are absent are white in the color bar. Whisker plots show the log₁₀(expression) of the miRNAs in the submodule. See also Figures S4, S5 and S6 in Additional file 1.