Transcriptomics-based screen for genes induced by flagellin and repressed by pathogen effectors identifies a cell wall-associated kinase involved in plant immunity

Table 1 Details of the treatments used for RNA sequencing analysis of the tomato immune response

Treatment	Concentration	Comment
flgII-28	1 μM	28-amino acid peptide from Pseudomonas syringae pv. tomato T1
Pseudomonas syringae pv. tomato (Pst) DC3000	5 × 10⁶ cfu/mL	Wild-type Pst strain
DC3000ΔhrcQ-UΔfliC	5 × 10⁶ cfu/mL	DC3000 mutant, lacking a functional T3SS and flagellin
DC3000ΔavrPtoΔavrPtoB	5 × 10⁶ cfu/mL	DC3000 mutant, with a functional T3SS, but lacking avrPto and avrPtoB
Pseudomonas fluorescens 55	10⁸ cfu/mL	Soil bacterium
Pseudomonas putida KT2240	10⁸ cfu/mL	Soil bacterium
Agrobacterium tumefaciens GV2260	10⁸ cfu/mL	Disarmed plant pathogen
MgCl₂	10 mM	Mock treatment
-	-	Untreated plants

ISSN: 1474-760X