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Figure 3 | Genome Biology

Figure 3

From: Transcriptomics-based screen for genes induced by flagellin and repressed by pathogen effectors identifies a cell wall-associated kinase involved in plant immunity

Figure 3

Clustering analysis reveals that AvrPto and AvrPtoB repress part of the transcriptional reprogramming that is a consequence of flagellin perception. Hierarchical clustering was based on genes and treatments. From the 17,597 genes expressed in leaves, those with a ratio max/min ≥3 over the various treatments were included in the analysis. Clusters A and B are enriched in genes decreased and increased by flagellin perception, respectively. The color scale shows the deviation from the median for each gene. The top two most enriched GO terms in the categories process (P), component (C) and function (F) are listed below each gene cluster. A., Agrobacterium; GO, gene ontology; P., Pseudomonas.

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Genome Biology

ISSN: 1474-760X

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