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Figure 1 | Genome Biology

Figure 1

From: Individual and combined effects of DNA methylation and copy number alterations on miRNA expression in breast tumors

Figure 1

Genomic localization of the 70 in- cis miRNAs. The 70 in-cis miRNAs were identified using Wilcoxon rank-sum tests to identify differential miRNA expression between patients in different aberration groups. miRNAs are color coded according to main aberration type of the miRNA locus (see legend). The number in parentheses under aberration type represents the number of in-cis miRNAs in the given aberration category. Inter-chromosomal and intra-chromosomal lines (the latter is seen as independent lines on chromosomes 8 and 13) link in-cis miRNAs to other members of the same miRNA family (see legend). miRNA family annotation is taken from TargetScan (release 6.2) [2, 33]. The plot was made using the Circos software package [34].

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