EXCAVATOR: detecting copy number variants from whole-exome sequencing data

Table 1 Summary statistics of the three datasets analyzed in this paper

Cohort	Test	Control	Capture	HTS	Mean depth	Mean depth
	samples	samples	version	platform	on tests	on controls
1000 Genomes Project	20	1	SureSelect	HiSeq2000	83 ×	107 ×
			All Exon V2
Melanoma	6	6	SureSelect	GA IIx	45 ×	41 ×
			All Exon 50 Mb
Intellectual disability	2	1	TruSeq	HiSeq2000	63 ×	65 ×
			Exome enrichment

ISSN: 1474-760X