Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors

Table 3 Results of the predicted enhancers for experimental validation in the second round of mouse reporter assays

Coordinates (hg19)			VISTA ID	Corresponding ID in mouse assay	Enhancer activity	Tissues with enhancer activity	Reproducibility
Chr1	39,629,409	39,631,707	hs1999	ENH_DISCR_2	Negative
Chr2	7,025,512	7,027,025	hs2015	ENH_DISCR_18	Negative
Chr2	68,419,973	68,421,991	hs2040		Positive	Nose	3/5
Chr2	159,885,988	159,889,012	hs2027		Positive	Heart	11/11
Chr2	169,971,561	169,974,373	hs2034	ENH_DISCR_37	Negative
Chr3	65,589,981	65,591,565	hs2038	ENH_DISCR_41	Negative
Chr3	72,368,145	72,370,230	hs2006		Negative
Chr3	124,304,700	124,307,917	hs2031	ENH_DISCR_34	Negative
Chr3	141,579,463	141,580,810	hs2041	ENH_DISCR_44	Positive	Limb	3/7
Chr4	109,893,210	109,895,294	hs2021	ENH_DISCR_24	Negative
Chr5	176,076,732	176,078,530	hs2007		Positive	Heart	3/7
Chr8	59,769,794	59,772,587	hs2029	ENH_DISCR_32	Negative
Chr9	75,758,359	75,760,288	hs2000		Negative
Chr11	74,781,340	74,785,285	hs2047		Negative
Chr12	31,867,650	31,868,817	hs2043		Negative
Chr16	89,384,737	89,387,643	hs2036		Negative
Chr17	45,368,528	45,369,514	hs2033		Positive
Chr17	73,347,819	73,348,933	hs2023	ENH_DISCR_26	Negative
Chr20	48,291,612	48,294,178	hs2045	ENH_DISCR_48	Negative
Chr22	21,953,368	21,954,302	hs2026	ENH_DISCR_29	Positive	Tail	9/17

ISSN: 1474-760X