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Table 4 Excess of L1 repeats in CNV breakpoints

From: Novel origins of copy number variation in the dog genome

Name Excessa Divergenceb Length (bp) Number of repeats in genome Number of repeats in breakpoints Number of breakpoints with repeats
L1_Cf 3.92 0.035 1,192 16,127 178 137
L1_Canis 2.54 0.088 799 72,587 678 309
L1_Canid 1.87 0.144 534 42,070 254 135
L1_Carn 1.25 0.168 525 132,806 652 275
Eutheria 0.91 0.246 359 589,155 2046 590
  1. aThe proportion of repeat coverage in breakpoints versus whole genome. bAverage divergence of the repeat from its reference in RepBase.