| Method | ||
---|---|---|---|
 | Original | SOAPdenovo | GapFiller |
Saccharomyces cerevisiae | Â | Â | Â |
   Genome size (bp) | 11,388,647 | 11,388,600 | 11,388,609 |
   Scaffolds | 334 | 334 | 334 |
   Gap count | 283 | 67 | 45 |
   Total gap length (bp) | 19,358 | 994 | 2,873 |
   Errors (SNPs) | 890 | 1,033 | 931 |
   Errors (indels) | 565 | 754 | 648 |
   Errors (misjoins) | 23 | 42 | 31 |
   N50 | 84,640 | 84,640 | 84,649 |
Homo sapiens (chromosome 14) | Â | Â | Â |
   Genome size (bp) | 95,081,274 | 95,059,687 | 95,072,801 |
   Scaffolds | 19,249 | 19,249 | 19,249 |
   Gap count | 2,820 | 1,986 | 1,682 |
   Total gap length (bp) | 949,137 | 423,107 | 699,550 |
   Errors (SNPs) | 76,653 | 79,266 | 76,928 |
   Errors (indels) | 21,261 | 23,144 | 22,338 |
   Errors (misjoins) | 179 | 224 | 187 |
   N50 | 7,748 | 8,262 | 8,469 |