Table 1 Comparison of performance of methods with respect to identifying the four inversions on Venter chromosome 17
From: An integrative probabilistic model for identification of structural variation in sequencing data
Method | Minimum number to detect 3 | Minimum number to detect 4 |
|---|---|---|
High quality alignments | ||
Breakdancer | 3 | NA |
GASV | 3 | NA |
GASVPro-HQ | 3 | NA |
Hydra-HQ | 4 | NA |
All alignments | ||
GASVPro | 3 | 4 |
Hydra | 5 | 10 |