Skip to main content

Table 3 Enrichment of Gene Ontology terms for genes with non-synonymous SNPs

From: Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome

Wheat accession

GO group

GO term

Name

FDR

Genes with non-synonymous mutations

Ld

Biological process

0006412

Translation

0.004

Under-represented

 

Cellular localization

0005840

Ribosome

 

Under-represented

  

0016020

Membrane

0.020

Under-represented

  

0005623

Cell

0.050

Under-represented

 

Molecular function

0005198

Structural molecular activity

0.003

Under-represented

Td

Biological process

0009987

Cellular process

0.001

Under-represented

  

0006629

Lipid metabolic process

0.047

Under-represented

  

0006091

Generation of precursor metabolites and energy

0.038

Under-represented

 

Cellular localization

0016020

Membrane

0.001

Under-represented

  

0009579

Thylakoid

0.048

Under-represented

 

Molecular function

0003824

Catalytic activity

0.022

Under-represented

  

0003700

Transcription factor activity

0.045

Over-represented

  

0016787

Hydrolase activity

0.013

Under-represented

  

0008270

Zinc ion binding

0.015

Over-represented