Table 4 Statistics for cDNA sequences included in multi-library transcriptome assembly of 246,196 unigenes with lengths greater than 100 bp
Tissue - library name | Sequencing method | Number of reads | Unscreened reads | Total passing bases (MB) |
|---|---|---|---|---|
Apical meristem - Atr12 | 454 FLX Titanium | 794,746 | 688,305 | 201.90 |
Male flowers - Atr15 | 454 FLX Titanium | 277,023 | 255,213 | 73.49 |
Old leaves - Atr14 | 454 FLX Titanium | 280,097 | 260,563 | 73.49 |
Old stem - Atr13 | 454 FLX Titanium | 259,431 | 238,156 | 68.70 |
Pre-meiotic female flower buds - Atr10 | 454 FLX GS | 895,000 | 812,325 | 176.97 |
Pre-meiotic female flower bud - Atr02 | Sanger | 13,263 | 13,141 | 7.17 |
Pre-meiotic male flower bud - Atr01 | Sanger | 25,343 | 25,006 | 14.17 |
Root - Atr11 | 454 FLX GS | 324,070 | 300,275 | 64.88 |
Stem - Atr16 | 454 FLX Titanium | 410,098 | 388,436 | 120.03 |