Figure 2
From: Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis
Schematic representation of the analysis pathway used in this study. In this two step process, (1) a list of putative SNPs, relative to Col-0, were generated for each genome (ebi-1 and Ws-2) for each of the five possible matching schemas (25_2, 25_3, 35_2, 35_3, and 35_4) used by the Corona_lite software pipeline. Then (2), considering each chromosome (chr1, chr2, chr3, chr4, chr5, mitochondrial chromosome (chrM), and chloroplast (chrC)) in turn, the results of each schema were analyzed and filtered, and finally merged to form a collection of high-confidence SNPS used in the subsequent analysis (summarized in Tables 1 and 2).