Table 3 Number and distribution of coding region SNPs in Pfam domain-containing genes in the resequenced sorghum genomes
From: Genome-wide patterns of genetic variation in sweet and grain sorghum (Sorghum bicolor)
| Â | Bona fidegenes | Low confidence genes | Transposons | Pseudogenes | Total | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | Non-syn | Syn | Non-syn/ Syn | Non-syn | Syn | Non-syn/ Syn | Non-syn | Syn | Non-syn/ Syn | Non-syn | Syn | Non-syn/ Syn | Non-syn/Syn |
Ji2731 | 17,694 | 14,798 | 1.20 | 921 | 567 | 1.62 | 489 | 259 | 1.89 | 0 | 0 | 0.00 | 1.22 |
Keller | 10,503 | 8,156 | 1.29 | 560 | 295 | 1.90 | 301 | 173 | 1.74 | 101 | 97 | 1.04 | 1.31 |
E-Tian | 13,439 | 11,197 | 1.20 | 600 | 373 | 1.61 | 341 | 219 | 1.56 | 146 | 119 | 1.23 | 1.22 |
Total | 28,551 | 23,182 | 1.23 | 1,608 | 965 | 1.67 | 897 | 504 | 1.78 | 209 | 174 | 1.20 | 1.26 |