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Table 4 Indels and substitution errors in B-tail trimmed reads

From: Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and Genome Analyzer systems

Data set

Uniquely aligned bases

Substitution errors (rate)

Indels (rate)

Bv-95nt

4,900,840

7,615 (0.16%)

84 (1.7 E-5)

PhiX-95nt

778,014,176

830,351 (0.11%)

3,789 (4.9 E-6)

At-100nt

1,111,314,053

1,792,190 (0.16%)

26,130 (2.4 E-5)

PhiX-100nt

170,078,494

203,729 (0.12%)

546 (3.2 E-6)

PhiX-GAIIx

1,760,062,929

4,936,167 (0.28%)

7,077 (4.0 E-6)