Skip to main content

Advertisement

Table 1 Human unitary pseudogenes

From: Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates

Human unitary pseudogene genomic location Mouse ortholog symbol Mouse gene name
chr12+:110821507-110823878 Adam1b a disintegrin and metallopeptidase domain 1b
chr8+:17371392-17373372 Adam26B a disintegrin and metallopeptidase domain 26B
chr8-:39450156-39489335 Adam3 a disintegrin and metallopeptidase domain 3 (cyritestin)
chr8+:39299218-39358412 Adam5 a disintegrin and metallopeptidase domain 5
chr9-:103136199-103141451 Acnat2 acyl-coenzyme A amino acid N-acyltransferase 2
chr18+:54814947-54887164 Acyl3 acyltransferase 3 [RIKEN cDNA 5330437I02 gene]
chr1+:92304452-92305907 Aytl1b acyltransferase like 1B
chr11+:71909632-71910345 Art2b ADP-ribosyltransferase 2b
chr2+:201166115-201364602 Aox3l1 aldehyde oxidase 3-like 1
chr16+:2351147-2415839 Abca17 ATP-binding cassette, sub-family A (ABC1), member 17
chr1-:51789487-51812353 Calr4 calreticulin 4
chr16-:30823174-30826438 Ctf2 cardiotrophin 2
chr4-:123871155-123872802 Cetn4 centrin 4
chr19-:46006279-46009136 Cyp2t4 cytochrome P450, family 2, subfamily t, polypeptide 4
chr2-:178665477-178677441 Cyct cytochrome c, testis
chr4-:68540001-68564082 Desc4 Desc4 [RIKEN cDNA 9930032O22 gene]
chr11-:67136888-67140266 Doc2 g double C2, gamma
chr9+:35423704-35439561 Feta Feta [RIKEN cDNA 4930417 M19 gene]
chr10-:114057930-114106344 Gucy2 g guanylate cyclase 2 g
chr8:27473706-27502505 Gulo gulonolactone (L-) oxidase
chr1-:226718541-226718916 Hist3 h2ba histone cluster 3, H2ba
chr7+:123241442-123256569 Hyal6 hyaluronoglucosaminidase 6
chr9-:114761447-114764366 Mup4 major urinary protein 4
chr10+:81670064-81672769 Mbl1 mannose binding lectin (A) 1
chr6+:118061593-118072916 Nepn nephrocan
chr3+:47028800-47029644 Nradd neurotrophin receptor associated death domain
chr1+:115181467-115195621 Nr1 h5 nuclear receptor subfamily 1, group H, member 5
chrX+:101400687-101403403 Prame preferentially expressed antigen in melanoma
chr1+:200404371-200425048 Ptprv protein tyrosine phosphatase, receptor type, V
chr5+:140786050-140870922 Pcdhgb8 protocadherin gamma subfamily B, 8
chr19+:53875091-53876096 Sec1 secretory blood group 1
chr20-:1696610-1708642 Sirpb3 Sirpb3 [RIKEN cDNA F830045P16 gene]
chr2+:20449670-20459798 Slc7a15 solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
chr4-:70692183-70714196 Sult1d1 sulfotransferase family 1D, member 1
chr7+:142844251-142845153 Tas2r134 taste receptor, type 2, member 134
chr17+:59285910-59292052 Tcam1 testicular cell adhesion molecule 1
chrX+:83901067-83903982 Tex16 testis expressed gene 16
chr14-:63882652-63893934 Tex21 testis expressed gene 21
chr8-:145268106-145414584 Tssk5 testis-specific serine kinase 5
chr17-:73756179-73757460 Tha1 threonine aldolase 1
chr1+:33704438-33707143 Tlr12 toll-like receptor 12
chr6:-132971083-132972109 Taar3 trace amine-associated receptor 3
chr6-:132957230-132958269 Taar4 trace amine-associated receptor 4
chr11+:3587708-3615320 Trpc2 transient receptor potential cation channel, subfamily C, member 2
chr4-:68314827-68322204 Tmprss11c transmembrane protease, serine 11c
chr16-:2829662-2831734 Tmprss8 transmembrane protease, serine 8 (intestinal)
chr1-:84603696-84623086 Uox urate oxidase
  1. See Table S2 in Additional file 1 for the list of 29 human unitary pseudogenes identified using unannotated mouse gene transcripts.