Table 2 KEGG pathways enriched in the set of genes represented in modular subnetworks
KEGG pathway | P-value |
|---|---|
Ribosome | 2.17E-27 |
Metabolic pathways | 2.70E-15 |
Proteasome | 2.33E-10 |
Pyrimidine metabolism | 1.34E-09 |
Purine metabolism | 7.08E-07 |
DNA replication | 1.54E-06 |
Nucleotide excision repair | 1.81E-05 |
Aminoacyl-tRNA biosynthesis | 2.80E-05 |
Cell cycle | 4.37E-05 |
Glutamate metabolism | 1.54E-04 |
Glycolysis/gluconeogenesis | 2.97E-04 |
Citrate cycle (TCA cycle) | 5.41E-04 |
Methionine metabolism | 1.25E-03 |
Ubiquitin mediated proteolysis | 7.19E-03 |
Pyruvate metabolism | 7.27E-03 |
Base excision repair | 7.38E-03 |
Glyoxylate and dicarboxylate metabolism | 7.39E-03 |
Arginine and proline metabolism | 8.35E-03 |
Glycine, serine and threonine metabolism | 8.38E-03 |
Pentose phosphate pathway | 1.23E-02 |
Valine, leucine and isoleucine biosynthesis | 1.30E-02 |
One carbon pool by folate | 1.30E-02 |
RNA polymerase | 1.76E-02 |
Alanine and aspartate metabolism | 1.76E-02 |
Non-homologous end-joining | 2.15E-02 |
Selenoamino acid metabolism | 2.17E-02 |
Mismatch repair | 2.20E-02 |