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Table 1 Genetic diversity in continental groups and populations

From: Genetic diversity in India and the inference of Eurasian population expansion

  nInd S Sp θ π(π10-5) H(π10-5) Hap Het Tajima's D P
Continent          
India 152 533 237 84.70 (82.72-86.68) 83.68 (79.20-88.17) 77.53 0.89 -0.04 0.97
Africa 152 656 416 104.25 (101.82-106.68) 85.28 (80.71-89.86) 78.03 0.95 -0.57 0.57
Europe 152 535 205 85.02 (83.03-87.01) 74.64 (70.63-78.65) 67.95 0.88 -0.38 0.70
East Asia 152 436 186 69.29 (67.66-70.92) 73.61 (69.66-77.57) 73.10 0.90 0.19 0.85
Population          
Brahmin 23 287 16 65.30 (59.72-70.88) 75.08 (64.51-85.64) 60.02 0.79 0.55 0.58
GIH 24 282 47 63.54 (58.27-68.81) 72.41 (62.45-82.38) 60.96 0.87 0.51 0.61
Irula 23 292 20 66.44 (60.76-72.12) 82.77 (71.13-94.40) 95.12 0.89 0.90 0.37
Mala/Madiga 24 342 46 77.06 (70.69-83.43) 84.46 (72.85-96.07) 89.33 0.87 0.35 0.73
Yadava 22 317 28 72.87 (66.45-79.29) 88.94 (76.15-101.73) 92.82 0.95 0.81 0.42
LWK 24 359 85 80.89 (74.21-87.57) 82.51 (71.17-93.86) 85.81 0.96 0.07 0.94
YRI 24 349 91 78.64 (72.14-85.14) 82.03 (70.75-93.31) 76.86 0.95 0.16 0.88
CEU 24 262 43 59.04 (54.13-63.94) 70.64 (60.91-80.37) 77.68 0.85 0.72 0.47
TSI 24 298 58 67.15 (61.58-72.71) 73.95 (63.78-84.13) 72.54 0.89 0.37 0.71
CHB 24 254 34 57.23 (52.47-61.99) 76.49 (65.97-87.01) 78.88 0.90 1.23 0.22
CHD 24 212 24 47.77 (43.78-51.76) 69.87 (60.24-79.49) 72.34 0.81 1.68 0.09
JPT 24 236 34 53.18 (48.75-57.61) 73.66 (63.52-83.80) 62.88 0.88 1.40 0.16
  1. nInd, number of individuals; S, number of segregating sites; Sp, number of private segregating sites; θ, estimated theta (4Neu) from S; π, nucleotide diversity; H, observed heterozygosity; Hap Het, averaged haplotype diversity over ten 10-kb windows; Tajima's D, Tajima's D; P, P-value for Tajima's D test. Confidence intervals of θ and π are shown in parentheses.