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Figure 2 | Genome Biology

Figure 2

From: Synorth: exploring the evolution of synteny and long-range regulatory interactions in vertebrate genomes

Figure 2

Synorth pipeline and three data views. (a) The Synorth data/analysis pipeline. (b) The Synorth genome locus browser: (A) navigation bar; (B) search field; (C) external link to other browsers (Ancora, UCSC Genome Browser, Ensembl and Vista) for the same region; (D) GRB genomic coordinates - the coordinates are the union of all synteny regions overlapping with the query gene - if no overlapping synteny region is found, no region will be shown; (E) reference species track; (F) track(s) of compared species - in each track, the species name and the sub-tracks for all synteny regions are shown; (G) browser legend; (H) chromosome color key for the compared species. For more details, see the description in the Help page of the Synorth website [20]. (c) Synorth table browser (d) Synorth tree browser.

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