Skip to main content

Table 8 Indication of intrachromosomal recombination in TgCkUg2

From: Whole genome sequencing of a natural recombinant Toxoplasma gondiistrain reveals chromosome sorting and local allelic variants

Locus position VIII-19
0.9 Mb
VIII-20
2.1 Mb
VIII-21
5.8 Mb
Me49 (II) A T G C T T T C T G A G C G
TgCkUg5 * * * * * * * * * * * * * *
TgCkUg8 * * * * A C * T * A * * * *
TgCkUg2 * * * * A C * T * A * A A T
TgCkUg6 T * C G * * C * C * T A A T
VEG (III) T C C G * * C * C * T A A T
  1. For loci VIII-19 and VIII-20 located around 0.9 and 2.1 Mb on chromosome VIII, TgCkUg2 is type II-like and shares some local allelic variants with TgCkUg8. Later on the chromosome, TgCkUg2 is type III-like, as shown by the VIII-21 locus and the major SNP type (Figure 1; Additional data file 1).