Skip to main content

Table 7 Local allelic variants in Ugandan T. gondii strains leading to amino acid changes in two surface proteins (SRSs) and one rhoptry protein (toxofilin)

From: Whole genome sequencing of a natural recombinant Toxoplasma gondiistrain reveals chromosome sorting and local allelic variants

Locus amino acid position

SRS22H (VI-13)

Toxofilin

SRS16B

 

111

113

138

139

140

141

143

144

146

150

147

168

176

77

Me49 (II)

E

E

K

P

S

A

H

R

T

D

L

E

K

A

TgCkUg5

*

G

*

G

*

*

*

*

*

*

*

*

R

*

TgCkUg9

*

*

*

*

*

*

*

*

*

V

*

D

R

*

TgCkUg7

*

*

*

*

*

*

*

*

*

*

Q

D

R

E

TgCkUg1

*

*

*

*

*

*

*

*

*

*

Q

*

*

E

TgCkUg8

*

*

*

*

*

*

*

*

*

*

Q

*

*

E

TgCkUg3

*

*

*

*

*

*

*

*

*

V

Q

*

*

E

TgCkUg2

D

G

T

G

T

G

R

*

P

V

Q

*

*

E

TgCkUg6

D

G

N

G

*

G

R

S

P

V

E

*

*

T

VEG (III)

*

*

*

*

*

*

*

*

*

*

E

*

*

T

GT1 (I)

*

G

S

A

T

E

R

S

D

G

Q

*

R

A

  1. Similarities to the reference sequence for Me49 are indicated by an asterisk.
Back to article page

Genome Biology

ISSN: 1474-760X

Contact us