SV size | Single cutoff | Multi-cutoff | Simplified multi-cutoff | Multi-cutoff* | Simplified multi-cutoff* |
---|---|---|---|---|---|
1000 | 3 (4) | 3 (4) | 3 (4) | 3 (4) | 3 (4) |
2000 | 12 (13) | 23 (26) | 21 (23) | 11 (13) | 6 (6) |
3000 | 52 (57) | 61 (68) | 61 (68) | 49 (52) | 44 (46) |
4000 | 84 (85) | 85 (86) | 85 (86) | 80 (82) | 80 (82) |
5000 | 91 (93) | 91 (93) | 91 (93) | 91 (93) | 91 (93) |
6000 | 92 (92) | 92 (92) | 92 (92) | 92 (92) | 92 (92) |
10000 | 88 (91) | 88 (91) | 88 (91) | 88 (91) | 88 (91) |
Total | 422 (435) | 443 (460) | 441 (457) | 414 (427) | 404 (414) |
False positives (chromosome 2) | 31 (31) | 31 (31) | 26 (31) | 5 (4) | 2 (1) |