From: Sequence-based feature prediction and annotation of proteins
http://www.bioinformatics.ca/links_directory
http://www.ncbi.nlm.nih.gov/Tools
http://www.ebi.ac.uk/Tools
http://www.expasy.org/tools
http://www.cbs.dtu.dk/services
http://hum-molgen.org/bioinformatics
http://sites.univ-provence.fr/~wabim/english/logligne.html
http://www.bioinformatics.fr/bioinformatics.php
http://www.brc.dcs.gla.ac.uk/~mallika/bioinformatics-tools.html