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Table 1 Performance measures

From: Overview of BioCreative II gene mention recognition

Rank P r F signif % alt
1 0.8848 0.8597 0.8721 4-19 32.48
2 0.8930 0.8449 0.8683 6-19 14.02
3 0.8493 0.8828 0.8657 6-19 14.08
4 0.8727 0.8541 0.8633 7-19 31.77
5 0.8577 0.8680 0.8628 7-19 16.67
6 0.8271 0.8932 0.8589 7-19 16.02
7 0.8697 0.8255 0.8470 8-19 14.83
8 0.8435 0.8139 0.8285 10-19 14.57
9 0.8628 0.7966 0.8284 10-19 14.55
10 0.8554 0.7683 0.8095 11-19 19.76
11 0.7295 0.8849 0.7997 13-19 16.82
12 0.9267 0.6891 0.7905 14-19 19.73
13 0.8883 0.6970 0.7811 15-19 37.05
14 0.8046 0.7361 0.7688 16-19 20.43
15 0.8228 0.7108 0.7627 17-19 16.80
16 0.8432 0.6857 0.7563 17-19 34.02
17 0.7168 0.6233 0.6668 18-19 28.23
18 0.6056 0.6411 0.6229 19 31.71
19 0.5009 0.4612 0.4802 - 28.46
  1. The precision, recall, and F score for the best submitted run from each of 19 workshop participants, sorted by F score. Each team has an F score that has a statistically significant comparison (P < 0.05) with the teams indicated in the signif column. The column labeled % alt is the percentage of true positives in the submission that matched an ALTGENE annotation.