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Table 1 General features of OG1RF compared to V583

From: Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF

 

V583

 

OG1RF

General features

   

Size (base pairs)

3,218,031

 

2,739,633

G+C content (%)

37.5

 

37.8

rRNA genes

12

 

12

tRNA genes

68

 

58

Genes common to both strains

 

2,474*

 

Genes unique to OG1RF

   

Similar to known proteins

  

114†

Conserved hypotheticals

  

50

No database match

  

63

Total

  

227

Total number of ORFs

3,113

 

2,701‡

  1. *The assessment of the genes common to both strains is based on the homology at the DNA level with the ORFs described for V583 (source TIGR [70]). The BLASTN cutoff e-value was 1e-5. †This number includes the proteins with domain polymorphism (see text for details). ‡Estimated number of ORFs calculated by adding the OG1RF-unique ORFs to the number of ORFs shared with V583.