Table 1 Summary of pancreas SAGE libraries generated
From: Identification of transcripts with enriched expression in the developing and adult pancreas
Accession | Stage | Tissue subtype | Cell types represented | Library type | Tags sequenced* | Tag types |
|---|---|---|---|---|---|---|
SM161/SM244 | TS17 | Pdx1 EGFP+†| All pancreas epithelial cells with the exception of rare Glucagon-positive cells | Long SAGElite | 306,588 | 44,491 |
SM231 | TS19 | Pdx1 EGFP+ | All pancreas epithelial cells with the exception of rare Glucagon-positive cells | Long SAGElite | 317,716 | 49,572 |
SM162/SM245 | TS20 | Ngn3 EGFP-†| A mixture of pancreas cell types composed predominantly of mesenchymal cells and pancreas epithelial progenitors as well as those destined to become exocrine cell types | Long SAGElite | 308,745 | 47,695 |
SM243/SM160 | TS20 | Ngn3 EGFP+ | All endocrine progenitor cells as well as endocrine cells at various stages of maturation | Long SAGElite | 320,473 | 51,847 |
SM225/SM249 | TS21 | Ngn3 EGFP+ | All endocrine progenitor cells as well as endocrine cells at various stages of maturation | Long SAGElite | 313,503 | 58,864 |
SM232 | TS22 | Ngn3 EGFP+ | All endocrine progenitor cells as well as endocrine cells at various stages of maturation | Long SAGElite | 301,222 | 37,726 |
SM223 | TS22 | Whole | A mixture of pancreas cell types composed predominantly of pancreas epithelial cells differentiating into exocrine cell types with some endocrine cells and mesenchymal cells | Long SAGE | 98,189 | 13,676 |
SM016 | TS26 | Whole | A mixture of pancreas cell types composed predominantly of pancreas epithelial cells differentiating into exocrine cell types with some endocrine cells and mesenchymal cells | Long SAGE | 81,130 | 17,963 |
SM102 | DPN70 | Isolated ducts | Hand picked adult ducts isolated by collagenase treatment and gradient centrifugation | Long SAGE | 119,024 | 23,528 |
SM017 | DPN70 | Isolated islets | Hand picked adult islets isolated by collagenase treatment and gradient centrifugation composed of each of the major endocrine cell types | Long SAGE | 99,968 | 16,039 |