Table 4 Potential mobile regions and their major characteristics
Mobile region | Putative length, approx. (bp) | G+C content (%) | Putatively bounded by (repeat length, bp) | Major characteristics |
|---|---|---|---|---|
Potential conjugative transposon | 43,769 | 62.7 | 19 | Hypotheticals, lipoproteins and an efflux protein cargo |
Potential complex transposon insertion | 97,538 | 61.9 | 18 | Efflux transporters, mercury, arsenic and copper resistance, co-integrate resolution and integrases. May be a multiple insertion* |
Potential complex transposon insertion | 52,344 | 60.5 | 20 | Tra genes and adhesins, DNA repair, conserved and unique hypotheticals. May be a multiple insertion. Carries IS elements and Tn5044 similarity |
ISXac3-like | 1,157 | 65.1 | ND | Seven intact copies and two pseudogenic copies |
ISHne3/IS111A-like | 915 | 61.7 | ND | Eleven intact copies |
ISpsy9 | 1,352 | 58.8 | ND | Four intact copies |
Phage cluster 1 | 118,000 | 63.7 | ND | Putative pseudogenic phage. Putative IS insertion and tRNA located centrally |
Phage cluster 2 | 37,992 | 63.2 | ND | Putative intact phage |