Table 5 Estimated total repetitive DNA in T. castaneum genome assembly
From: Analysis of repetitive DNA distribution patterns in the Tribolium castaneum genome
Tools | Percentage of genome masked | Percentage of masked genome overlapping with RepeatScout |
|---|---|---|
RepeatScout | 25.7 | N/A |
TRF | 4.9 | 1.5 |
TEpipe | 5.8 | 5.2 |
Total | 36.4 | 6.7 |
Total repetitive DNA in Tribolium genome | 36.4 - 6.7 = 29.7 | |