Figure 2From: The impact of the neisserial DNA uptake sequences on genome evolution and stabilityConsistent neisserial phylogenetic trees. (a) From the concatenated ubiquitous gene alignment (numbers indicate nonparametric bootstrap results in percentage out of 1,000 experiments); (b) from the concatenated 1,000 nucleotides regions (± 500 nucleotides) surrounding ubiquitous DNA uptake sequence (DUS) sites in the M-GCAT multiple alignment; and (c) entire concatenated M-GCAT multiple alignment. Distance matrices were computed from the alignments using Tree-Puzzle [85] by maximum likelihood with the HKY+Γ model and trees computed with BIONJ [86].Back to article page