Table 4 Alternative splicing events detected in cDNAs, all G-Mo.R-Se models, and CDS portions of G-Mo.R-Se models
cDNAs: 7,895 loci | Models (all): 19,486 loci | Models (CDS): 12,341 loci | |||
|---|---|---|---|---|---|
Number (%) | Number (%) | Number (%) | Events common to cDNAs and models | % of cDNA events | |
Alternative acceptor/donor | 690 (73.1%) | 7,405 (62.5%) | 2,988 (58.0%) | 156 | 22.6 |
Skipped | 250 (26.5%) | 3,656 (30.9%) | 1,677 (32.5%) | 18 | 7.2 |
Mutually exclusive | 4 (0.4%) | 781 (6.6%) | 487 (9.5%) | 1 | 25.0 |
Intron retention | 1,227 | - | - | - | - |
Total | 2,171 (944 without IR) | 11,842 | 5,152 | 175 | 18.5 |
Total number of loci with alternative splicing (% of all identified loci) | 783 (9.9%) (598 without IR) | 1,602 (8.2%) | 1,029 (8.3%) | - | - |