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Table 1 Tests of known CNCS functional elements

From: Assaying the regulatory potential of mammalian conserved non-coding sequences in human cells

Element

Reference

DNaseI hypersensitivity

E1

[5]

HeLa, GM06990

E52

[5]

HL60

E74

[5]

-

E76

[5]

CACO2, GM06990, HeLa, HL60

E260

[5]

CACO2, GM06990

E359

[5]

CACO2, GM06990, HL60

DC2

[5]

-

MCS-1.3

[10]

HeLa, HL60

MCS-8.7

[10]

CACO2, HL60

MCS-32

[10]

HL60

MCS+9.7

[10]

CACO2, GM06990

  1. Cell types listed are those in which the indicated element exhibited DNaseI hypersensitivity. The genomic coordinates of each element are shown in Table S4 in Additional data file 2.
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Genome Biology

ISSN: 1474-760X

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