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Table 4 Comparison of correlation coefficients for Pearson/Spearman correlations between ABA, GNF, and Teragenomics data sets

From: Quantitative methods for genome-scale analysis of in situ hybridization and correlation with microarray data

Structure

ABA, GNF1

ABA, TERA1

GNF1, TERA1

Striatum

0.490/0.373 (8,669)

0.503/0.520 (4,614)

0.711/0.618 (3,398)

Cortex

0.483/0.418 (9,502)

0.506/0.549 (4,568)

0.728/0.647 (3,693)

Cerebellum

0.417/0.388 (8,726)*

0.385/0.496 (4,631)*

0.731/0.661 (3,490)

Hippocampus

0.506/0.427 (8,751)

0.505/0.578 (4,585)

0.732/0.644 (3,410)

Olfactory bulb

0.464/0.403 (8,811)*

0.436/0.515 (4,582)*

0.727/0.656 (3,437)

Hypothalamus

0.518/0.396 (8,571)

0.492/0.501 (4,566)

0.716/0.658 (3,479)

  1. Each correlation (Pearson/Spearman) is shown followed by the number of genes. *Pearson correlation in the first two columns for cerebellum and olfactory bulb differ at a significance level α = 0.05.
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Genome Biology

ISSN: 1474-760X

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