Table 2 Stem cell markers

[74]

Differentiated retinal

309L

?

-

-

-

-

Rho1D4 (rhodopsin)

?

-

-

-

-

D2P4 (rhodopsin)

?

-

-

-

-

CHX10

Chx10

1419628_at.A

Not found

Not found

PKC

^a

-

-

-

-

ROM-1

Rom1

1448996_at.A

879

0.942

Photoreceptor specific homeobox

Crx

Crx

1418705_at.A

Not found

Not found

Muller glia

10E4

?

-

-

-

-

[75]

Human central nervous system

CD24-/lo

CD24a

1416034_at.A

573

0.987

2

CD34-

CD34

1416072_at.A

72

0.990

2

CD45-

Ptprc

1422124_a_at.A

427

0.987

Human neuronal lineage

N-CAM

Ncam1

1426864_a_at.A

318

1.000

Neural

CD133

Prom1

1419700_a_at.A

573

0.930

2

Hematopoietic

CD133

Prom1

1419700_a_at.A

573

0.930

2

[76]

Proliferating neural

Ki-67

Mki67

1426817_at.A

8

0.991

[77]

Trophoblast

Cdx2

Cdx2

1422074_at.A

Not found

Not found

Ectoderm

Fgf5

Fgf5

1438883_at.B

442

1.000

Neuroectoderm

Isl1

Isl1

1422720_at.A

83

0.931

Pluripotent stem cell

Nanog

Nanog

1429388_at.A

390

0.947

Oct3/4

Pou5f1

1417945_at.A

151

1.000

Rex1

Zfp42

1418362_at.A

547

0.964

Mesoderm

Brachyury

T

1419304_at.A

232

0.938

[78]

Neural stem cell

Hu

?

-

-

-

-

Neuralstemmin

?

-

-

-

-

ABCG2

Abcg2

1422906_at.A

Not found

Not found

3

LeX/SSEA-1

Fut4

1455843_at.B

771

0.924

Musashi (Msi1)

Msi1

1421409_at.A

Not found

Not found

2

Sox-1

Sox1

1438729_at.B

542

0.958

Sox-2

Sox2

1416967_at.A

71

0.986

[79]

Muscle specific

MCK (muscle creatine kinase)

Ckm

1417614_at.A

104

1.000

MHC (myosin heavy chain)

Myh4

1427026_at.A

Not found

Not found

Myofiber sarcolemma

Dystrophin

Dmd

1417307_at.A

835

0.958

Basal lamina

Laminin

^a

-

-

-

-

Myogenic lineage

Myf5

Myf5

1420757_at.A

Not found

Not found

MyoD

Myod1

1418420_at.A

32

1.000

Late myogenic lineage

MRF4

Myf6

1419150_at.A

Not found

Not found

Myogenin

Myog

1419391_at.A

104

1.000

Satellite cells

Pax7

Pax7

1452510_at.A

Not found

Not found

[80]

Neural restricted precursors

MAP2

Mtap2

1434194_at.B

108

1.000

2

Beta3 tubulin

Tubb3

1415978_at.A

Not found

Not found

[81]

SKP

Fibronectin

Fn1

1426642_at.A

681

0.984

GAP43

Gap43

1423537_at.A

363

0.959

MAP2

Mtap2

1434194_At.B

108

1.000

2

Nestin

Nes

1449022_at.A

73

0.980

2

p75NTR

Ngfr

1421241_at.A

Not found

Not found

Vimentin

Vim

1450641_at.A

770

0.977

[82]

Hematopoietic stem cell

BCRP1

Abcg2

1422906_at.A

Not found

Not found

Epidermal side population

BCRP1

Abcg2

1422906_at.A

Not found

Not found

3

alpha6-integrin

Itga6

1422444_at.A

Not found

Not found

2

beta1-integrin

Itgb1

1426918_at.A

13

0.967

2

keratin 14

Krt1-14

1460347_at.A

386

0.983

Sca-1

Ly6a

1417185_at.A

637

0.929

2

CD34-

CD34

1416072_at.A

72

0.990

2

E-cadherin

Cdh1

1448261_at.A

48

0.993

Keratin 19

Krt1-19

1417156_at.A

268

0.989

2

CD71-

Tfrc

1452661_at.A

845

0.958

[83]

Muller glia; retinal

Gln synthetase

Glul

1426235_a_at.A

573

0.901

Retinal

syntaxin

^a

-

-

-

-

Pax6

Pax6

1419271_at.A

374

0.960

rhodopsin

Rho

1425171_at.A

Not found

[84]

Neural

(NeuN) Neuron specific protein

?

-

-

-

-

Neuron-specific enolase

Eno2

1418829_a_at.A

Not found

Not found

-

Osteoblasts

Alkaline phosphatase

Akp2

1423611_at.A

Not found

Not found

-

BMP2

Bmp2

1423635_at.A

Not found

Not found

-

BMP4

Bmp4

1422912_at.A

Not found

Not found

-

BMP Receptor 1

Bmpr1a

1425492_at.A

581

0.939

Bmpr1b

1437312_at.B

446

0.917

BMP Receptor 2

Bmpr2

1434310_at.B

602

0.954

PTH receptor

Pthr2

1452129_at.A

Not found

Type 1 collagen

^a

-

-

-

-

bone sialoprotein

Ibsp

1417484_at.A

Not found

PTH receptor

Pthr1

1417092_at.A

368

0.964

RunX-1

Runx1

1422865_at.A

295

0.982

osteonectin

Sparc

1448392_at.A

581

1.000

osteopontin

spp1

1449254_at.A

737

0.996

General stem cell factor receptor

CD117

Kit

1459588_at.B

243

0.912

Muscle

merosin

Lama2

1426285_at.A

799

0.986

Cartilage related extracellular matrix

aggrecan

Agc1

1449827_at.A

Not found

Not found

-

collagen II

^a

-

-

-

-

collagen IV

^a

-

-

-

-

PRELP

Prelp

1416322_at.A

231

0.958

Adipose derived stem cell

CD49d+

Itga4

1421194_at.A

Not found

Not found

-

CD106-

?

-

-

-

-

[85]

Mammary stem cell

Bmi-1

Bmi1

Not on array

-

-

-

p21

Cdkn1a

1424638_at.A

400

0.967

CD49f

Itga6

1422444_at.A

Not found

Not found

2

Cytokeratin 19

Krt1-19

1417156_at.A

268

0.989

2

Sca-1

Ly6a

1417185_at.A

637

0.930

2

Musashi (Msi1)

Msi1

1421409_at.A

Not found

Not found

2

Cytokeratin 5/6

?

-

-

-

-

[86]

Neural enrichment

CD24

CD24a

1416034_at.A

573

0.990

2

Skin

CD29

Itgb1

1426918_at.A

13

0.970

2

[87]

Neural

GFAP

Gfap

1426508_at.A

249

0.924

Neurofilament

Nefl

1426255_at.A

151

0.935

Nestin

Nes

1449022_at.A

73

0.980

2

Photoreceptors

Recoverin

Rcvrn

1450215_at.A

Not found

Not found

-

Epithelial lineage

Cytokeratin (904-clone 34betaB4?)

^a

-

-

-

-

CK18

Krt1-18

1448169_at.A

83

0.917

AE1

Slc4a1

1416464_at.A

41

1.000

[88]

Epithelial lineage

AE3

Slc4a3

1418485_at.A

391

0.931